Association result for Marker: HGVM8508127 (dbSNP:rs9373523) in data set HGVRS1158
Significance
p-value 1e-06
-log p-value (3 d.p.) 6.000
Phenotype Tuberculosis (HGVPM1044)
Study and data set GWAS of tuberculosis in Ghanain and Gambian populations (HGVST593)
Unspecified analysis(HGVRS1158)
Effect sizes
Odds ratio
OR plot odds ratio
OR value 1.3(95% CI:1.11-1.43)
OR description NULL
OR risk allele ? (frequency:0.81)
OR risk allele comment Risk Allele Frequency in Controls
Marker details
Observed alleles
5' upstream 30bp(allele seq)3' downstream 30bp
tcattttaagaaactaagatgtaagtcagt(T)gacccacatctcatgttcatggattagaag
tcattttaagaaactaagatgtaagtcagt(G)gacccacatctcatgttcatggattagaag
Genomic location Chr6:147,701,133..147,701,133 (view in genome browser: Ensembllink | UCSClink)
Mapped gene None
Marker status
and Revision History
This marker is currently ACTIVE (no revision history)
Links