Association result for Marker: HGVM1203521 (dbSNP:rs842304) in data set HGVRS1369
Significance
p-value 4e-06
-log p-value (3 d.p.) 5.398
Phenotype HIV-1 susceptibility (HGVPM1213)
Study and data set GWAS of HIV-1 susceptibility (HGVST706)
Unspecified analysis(HGVRS1369)
Effect sizes
Undefined effect size type
Effect size value 0(95% CI not supplied)
Effect size description NULL
Effect size risk allele ? (frequency:0.42)
Effect size risk allele comment Risk Allele Frequency in Controls
Marker details
Observed alleles
5' upstream 30bp(allele seq)3' downstream 30bp
CCATTGCCTTGATAAAGTCAGATGTAATCT(C)CACAGAAATCAATCCAGCTTCGCCAATATA
CCATTGCCTTGATAAAGTCAGATGTAATCT(A)CACAGAAATCAATCCAGCTTCGCCAATATA
Genomic location Chr9:7,682,601..7,682,601 (view in genome browser: Ensembllink | UCSClink)
Mapped gene None
Marker status
and Revision History
This marker is currently ACTIVE (no revision history)
Links